Package index
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NMcreateDoses()
- Easily and flexibly generate dosing records
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NMexec()
- Execute Nonmem and archive input data with model files
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NMreadSim()
- Read simulation results based on NMsim's track of model runs
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NMsim()
- Simulate from an estimated Nonmem model
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unNMsimModTab()
is.NMsimModTab()
merge(<NMsimModTab>)
t(<NMsimModTab>)
dimnames(<NMsimModTab>)
rbind(<NMsimModTab>)
cbind(<NMsimModTab>)
- Remove NMsimModTab class and discard NMsimModTab meta data
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unNMsimRes()
is.NMsimRes()
merge(<NMsimRes>)
t(<NMsimRes>)
dimnames(<NMsimRes>)
rbind(<NMsimRes>)
cbind(<NMsimRes>)
- Remove NMsimRes class and discard NMsimRes meta data
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NMsimTestConf()
- Summarize and test NMsim configuration
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NMsim_EBE()
- Use emperical Bayes estimates to simulate re-using ETAs
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NMsim_NWPRI()
- Simulate with parameter variability using the NONMEM NWPRI subroutine
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NMsim_VarCov()
- Simulate with parameter values sampled from a covariance step
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NMsim_asis()
- Simulation method that uses the provided control stream as is
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NMsim_default()
- Transform an estimated Nonmem model into a simulation control stream
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NMsim_typical()
- Typical subject simiulation method
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NWPRI_df()
- Add degrees of freedom by OMEGA/SIGMA block
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add()
- Create function that adds text elements to vector
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addEVID2()
- Add simulation records to dosing records
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addResVar()
- Add residual variability based on parameter estimates
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expandCovs()
- Create data set where each covariate is univariately varied
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genPhiFile()
- Generate a .phi file for further simulation with Nonmem
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inputArchiveDefault()
- Default location of input archive file
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overwrite()
- Create function that modifies text elements in a vector
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readParsWide()
- Parameter data from csv
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sampleParsSimpar()
- Sample model parameters using the `simpar` package
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simPopEtas()
- Generate a population based on a Nonmem model
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summarizeCovs()
- Summarize simulated exposures relative to reference subject